Page Not Found Permalink
Page not found. Your pixels are in another canvas.
Sitemap
A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
Benjamin D. Pedigo Permalink
Benjamin D. Pedigo
Page not in menu Permalink
This is a page not in th emain menu
Posts
Using Joblib and reproducible random numbers Permalink
Published:
python
import matplotlib.pyplot as plt
import numpy as np
import pandas as pd
import seaborn as sns
from joblib import Parallel, delayed
from sklearn.cluster import KMeans
from sklearn.datasets import make_blobs
from sklearn.metrics import adjusted_rand_score
from sklearn.mixture import GaussianMixture
Signal Flow Permalink
Published:
The following is some derivation of the “signal flow” calculation for a directed network used in Varshney et al. 2011 [1], as well as my own implementation and some simple simulations to attempt to understand this function better.
portfolio
Anna’s hummingbird
Calypte anna - Seattle, WA 
Eastern bluebird
Sialia sialis - Baltimore, MD 
publications
Connectal coding: discovering the structures linking cognitive phenotypes to individual histories Permalink
Published in Current opinion in neurobiology, 2019
Graspy: Graph statistics in python Permalink
Published in Journal of Machine Learning Research, 2019
Toward Community-Driven Big Open Brain Science: Open Big Data and Tools for Structure, Function, and Genetics Permalink
Published in Annual Review of Neuroscience, 2020
Statistical Connectomics Permalink
Published in OSF Preprints, 2020
talks
Talk 1 on Relevant Topic in Your Field Permalink
Published:
This is a description of your talk, which is a markdown files that can be all markdown-ified like any other post. Yay markdown!
Conference Proceeding talk 3 on Relevant Topic in Your Field Permalink
Published:
This is a description of your conference proceedings talk, note the different field in type. You can put anything in this field.
teaching
Biomedical Signals and Sensors
Undergraduate course, University of Washington, Department of Bioengineering, 2017
Biomedical Signals and Sensors
Undergraduate course, University of Washington, Department of Bioengineering, 2018
Neuro Data Design 1 & 2 Permalink
Undergraduate/graduate course, Johns Hopkins University, Department of Biomedical Engineering, 2019
I am a TA for the Neuro Data Design course taught by Dr. Joshua Vogelstein. We teach students how to develop open-source scientific software and apply it to neuroscience data.